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NGS shows promise in expanding immunotherapy to more cancer patients

Research into next-generation sequencing carried out at Brigham and Women’s Hospital suggests that revising current cancer care guidelines could allow approximately 6,000 more patients in the US to benefit from immunotherapy treatment each year.

Immunotherapy is a highly effective treatment for patients whose cancers harbour mismatch repair deficiency, and a new study identifies more cancer patients who could benefit from this form of therapy. Investigators from Brigham and Women’s Hospital, a founding member of the Mass General Brigham healthcare system, found that nearly 6% of endometrial cancer patients and 1% of colorectal cancer patients with mismatch repair deficiency were missed by immunohistochemistry, the current standard of care test for this condition.

In these missed cases, the condition was instead detected by next-generation sequencing, which researchers estimate could identify 6,000 additional patients in the U.S. who would otherwise not be offered immunotherapy. Results are published in the journal Cancer Cell.

“In colorectal cancer and endometrial cancer, which are the two types of cancer where mismatch repair deficiency is most commonly seen, immunotherapy is not the standard treatment unless a patient has this condition,” said first author Elias Bou Farhat MD, a postdoctoral research fellow in the division of Pulmonary and Clinical Care Medicine at Brigham and Women’s Hospital. “But in patients with this condition, even in late-stage cancer, those who receive immunotherapy can live for years and in some cases be potentially cured. Including next-generation sequencing as a complimentary testing practice could benefit patients in all phases of cancer, from pre-treatment to advanced stages.”

In this study, the researchers looked at a cohort of 1,655 patients from Brigham and Women’s Hospital and Dana-Farber Cancer Institute who either had colorectal or endometrial cancer and who received both immunohistochemistry and next-generation sequencing tests. The researchers observed that nearly 6% of the patients with endometrial cancer and 1% of the patients with colorectal cancer were missed as being mismatch repair deficient by immunohistochemistry but caught by next-generation sequencing. These patients responded better to immunotherapy than other treatments and their survival and treatment outcomes were the same as those who were found deficient by both tests.

Immunohistochemistry only detects mutations that affect the antigen; next-generation sequencing is a more sensitive test because it looks for more mutation characteristics. While the current work suggests that next-generation sequencing will be a more sensitive diagnostic tool in these cases, further studies are needed to confirm and generalise this study’s findings.

The study’s data also showed that in patients with the same cancer type at the same stage, those who did not receive immunotherapy had worse outcomes than those who did.

Next, the researchers would like to see if these findings apply to other sequencing panels and other cancer types. They also plan to investigate the potential role of other genetic deficiencies involved in the condition of mismatch repair deficiency.

  • Bou Farhat E, et al. Benchmarking Mismatch Repair Testing for Patients with Cancer Receiving Immunotherapy. Cancer Cell, DOI: 10.1016/j.ccell.2023.12.001

 

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